Agri-Food Pathogens Report

The increasing frequency and complexity of biological threats to our agri-food systems demands attention and innovative solutions.”  

– Dr. Shayan Sharif, Interim Vice-President (Research & Innovation)

About The Report

 

Food from Thought has synthesized the research from our program and engaged interest-holders to prepare this report on advancing resilience to future pandemics and emerging agri-food threats.

The Strengthening Surveillance, Prevention and Collaboration to Respond to Emerging Pathogens report (April 2025) also shares calls to action to prepare for emerging agri-food pathogens developed through collaboration between academia, government and industry.

Continue scrolling to learn more about the report including the calls to action (key recommendations), featured research spotlight and issue briefs

Report cover

Report Summary and Illustrated Guide

 

An illustrated guide to Food from Thought’s Agri-Food Pathogen report alongside a one-page summary including key messages and calls to action.

Hear from Dr. Shayan Sharif on CBC News: The National

As birds migrate back north, the risk of bird flu outbreaks continues to rise. This highly adaptive virus, which has significantly impacted animal health and the food supply chain, can quickly mutate and become highly transmissible to humans.

Calls to Action

To build resilience against future pandemics and biological threats, Food from Thought engaged interest-holders from industry, academia and government at a workshop in June 2024 to reflect on innovative research happening at the University of Guelph and to collaboratively identify how to break down sector barriers and integrate research quickly into use.

Policymakers, commodity group representatives and researchers together emphasized the need for:

  1. Establish a One Health Framework: To coordinate efforts across human, environmental and animal health and facilitate cross-sector collaboration and research integration, ensuring Canada can swiftly respond to emerging threats.
  2. Foster Multidisciplinary Collaboration: Partnerships between researchers, policymakers, and industry stakeholders are essential for advancing surveillance, biosecurity, and disease prevention efforts.
  3. Develop an “All-Threats” Data Infrastructure: Establishing a comprehensive data-sharing system across health and agricultural sectors to enhance early detection and response capabilities for any emerging biological threats.
  4. Invest in Science Communication and Knowledge Translation: Clear, accessible communication of scientific findings and health information is crucial for public trust, combating misinformation, and fostering evidence-based decisions.
  5. Prioritize Research and Innovation: Continued investment in research and innovation is essential to address emerging threats and improve pandemic preparedness.

Issue Briefs

Research conducted under the Food from Thought program at the University of Guelph has revealed significant opportunities to strengthen Canada’s response to emerging pathogens affecting both human and animal health.

The following briefing notes share key insights and action areas that stem from the report and conversations with industry, academia and government about how we can support effective surveillance and response capabilities in Canada.

Innovative Research Protecting Public Health

Canadian Agri-Food Industry Context

Dr. Lawrence Goodridge

Research Spotlight

The Power to Predict Pandemics

Dr. Lawrence Goodridge is transforming public health with predictive tools that identify disease outbreaks before they escalate. During the COVID-19 pandemic, his team’s wastewater surveillance detected the presence of virus variants like Delta and Omicron weeks before traditional methods. By analyzing virus particles shed in human waste, they provided critical data to guide Ontario’s pandemic response. To enhance their findings, Goodridge’s team integrated social media syndromic surveillance, analyzing posts where individuals reported symptoms. This dual approach proved especially effective in bridging gaps left by passive healthcare systems, which often fail to capture the full extent of outbreaks.